C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sec24 related gene family, member A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109092 Sec24a-005 ENSMUSG00000036391 10090 - 11:51721690-51756431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLungOvaryENSMUST00000109092
Transcript ID Adrenal Breast Colon Lung Ovary
ENSMUST00000109092 2.080±0.00 2.055±0.00 3.326±0.40 1.677±0.00 2.820±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089W CIL_00089W_0002 VISTA 11:51640537-52246109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006886 IEA intracellular protein transport
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0008270 IEA zinc ion binding
GO:0030127 IEA COPII vesicle coat
GO:0045714 IMP regulation of low-density lipoprotein particle receptor biosynthetic process
GO:0050714 IMP positive regulation of protein secretion
GO:2000189 IMP positive regulation of cholesterol homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322887 SEC24A-002 protein_coding Homo_sapiens 0 1857
ENST00000398844 SEC24A-001 protein_coding Homo_sapiens 0 1857
ENST00000507419 SAR1B-004 protein_coding Homo_sapiens 3e-21 108
ENST00000513123 SEC24A-003 protein_coding Homo_sapiens 0 529

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