C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | B cell CLL/lymphoma 11A (zinc finger protein) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000109516  |
Bcl11a-005 |
ENSMUSG00000000861 |
10090 | + |
11:24078117-24174123  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PG | CIL_0008PG_0002 | VISTA | 11:23715166-24317101 |
| CIL_0009DA | CIL_0009DA_0002 | VISTA | 11:23762086-24363576 |
| CIL_0008GM | CIL_0008GM_0002 | VISTA | 11:23795054-24396665 |
| CIL_0008WW | CIL_0008WW_0002 | VISTA | 11:24012332-24614280 |
| CIL_000881 | CIL_000881_0002 | VISTA | 11:24029867-24633908 |
| CIL_0007LM | CIL_0007LM_0002 | UCNEbase | 11:24062983-26981636 |
| CIL_0008BH | CIL_0008BH_0002 | VISTA | 11:24070835-24671855 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003714 | IDA | transcription corepressor activity |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IEA | cytoplasm |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0010629 | IMP | negative regulation of gene expression |
| GO:0016604 | IDA | nuclear body |
| GO:0016925 | IMP | protein sumoylation |
| GO:0030183 | IMP | B cell differentiation |
| GO:0030217 | IMP | T cell differentiation |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000087426
|
bcl11aa-001 | protein_coding | Danio_rerio | 0 | 248 |
|
ENSDART00000140827
|
bcl11ab-001 | protein_coding | Danio_rerio | 7e-18 | 97 |
|
ENSDART00000092040
|
bcl11ab-201 | protein_coding | Danio_rerio | 9e-17 | 94 |
|
ENST00000335712
|
BCL11A-001 | protein_coding | Homo_sapiens | 0 | 1402 |
|
ENST00000356842
|
BCL11A-002 | protein_coding | Homo_sapiens | 0 | 1402 |
|
ENST00000358510
|
BCL11A-006 | protein_coding | Homo_sapiens | 0 | 896 |
|
ENST00000359629
|
BCL11A-003 | protein_coding | Homo_sapiens | 0 | 2281 |
|
ENST00000409351
|
BCL11A-004 | processed_transcript | Homo_sapiens | 0 | 979 |
|
ENST00000477659
|
BCL11A-008 | processed_transcript | Homo_sapiens | 0 | 425 |
|
ENST00000479026
|
BCL11A-013 | processed_transcript | Homo_sapiens | 0 | 562 |
|
ENST00000489183
|
BCL11A-011 | processed_transcript | Homo_sapiens | 0 | 355 |
|
ENST00000489516
|
BCL11A-007 | processed_transcript | Homo_sapiens | 0 | 1810 |
|
ENST00000492272
|
BCL11A-010 | processed_transcript | Homo_sapiens | 0 | 555 |
