C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thyrotroph embryonic factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109553 Tef-001 ENSMUSG00000022389 10090 + 15:81802421-81826861 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109553
Transcript ID Adipose Adrenal Bladder Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109553 7.868±0.00 4.399±1.02 34.166±6.22 1.508±0.00 18.394±7.43 2.575±2.07 20.390±2.30 21.704±6.51 5.640±0.75 0.724±0.00 0.397±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065M CIL_00065M_0002 CGP 15:81744848-81826861

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003690 IDA double-stranded DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006351 IEA transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048511 IEA rhythmic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266304 TEF-001 protein_coding Homo_sapiens 0 1360
ENST00000406644 TEF-003 protein_coding Homo_sapiens 0 1664
ENST00000413942 TEF-004 protein_coding Homo_sapiens 0 689

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