C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cordon-bleu WH2 repeat
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109651 Cobl-006 ENSMUSG00000020173 10090 - 11:12236678-12464960 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLiverLungENSMUST00000109651
Transcript ID Adipose Adrenal Brain Breast Liver Lung
ENSMUST00000109651 0.159±0.00 0.178±0.05 4.195±0.00 0.862±0.00 0.262±0.12 0.690±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KL CIL_0008KL_0002 VISTA 11:11661856-12262621
CIL_00072I CIL_00072I_0003 CGP 11:11930508-12464960

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IGI neural tube closure
GO:0003779 IEA actin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265136 COBL-001 protein_coding Homo_sapiens 0 1086
ENST00000395540 COBL-006 protein_coding Homo_sapiens 0 1086
ENST00000395542 COBL-201 protein_coding Homo_sapiens 0 1604
ENST00000431948 COBL-003 protein_coding Homo_sapiens 0 771
ENST00000441453 COBL-005 protein_coding Homo_sapiens 0 1068
ENST00000443421 RP13-347D8.1-001 processed_pseudogene Homo_sapiens 0 774
ENST00000445054 COBL-002 protein_coding Homo_sapiens 0 429
ENST00000452534 COBL-004 protein_coding Homo_sapiens 0 1376
ENST00000462395 COBL-007 retained_intron Homo_sapiens 0 475

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