C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: echinoderm microtubule associated protein like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109860 Eml1-003 ENSMUSG00000058070 10090 + 12:108422816-108539564 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000109860
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000109860 21.607±12.89 2.142±0.61 13.864±0.89 8.754±3.76 6.036±0.91 6.098±1.72 3.307±0.79 5.019±0.83 0.925±0.43 9.454±2.39 15.146±6.37 2.424±1.78 0.760±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CK CIL_0009CK_0002 VISTA 12:107949271-108552884
CIL_0003HG CIL_0003HG_0002 CGP 12:108334377-108539617
CIL_0003HN CIL_0003HN_0002 CGP 12:108370957-108688513

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0005829 IDA cytosol
GO:0005874 IEA microtubule
GO:0007052 IMP mitotic spindle organization
GO:0007405 IMP neuroblast proliferation
GO:0007420 IMP brain development
GO:0008017 IDA microtubule binding
GO:0015631 ISS tubulin binding
GO:0097431 IMP mitotic spindle pole
GO:1990023 IMP mitotic spindle midzone

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262233 EML1-001 protein_coding Homo_sapiens 0 2859
ENST00000327921 EML1-003 protein_coding Homo_sapiens 0 2348
ENST00000334192 EML1-002 protein_coding Homo_sapiens 0 2405
ENST00000553313 EML1-020 retained_intron Homo_sapiens 0 540
ENST00000555096 EML1-009 nonsense_mediated_decay Homo_sapiens 0 475
ENST00000556714 EML1-010 protein_coding Homo_sapiens 0 869

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