C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: unc-5 homolog A (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109994 Unc5a-002 ENSMUSG00000025876 10090 + 13:54949411-55006018 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109994
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109994 7.897±2.31 6.289±0.84 15.756±3.53 8.702±1.66 10.912±3.39 1.909±0.45 0.337±0.11 0.851±0.17 0.359±0.15 0.952±0.20 5.530±0.42 1.500±0.35 3.963±2.33 0.337±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098R CIL_00098R_0002 VISTA 13:54491283-55092527
CIL_0002NA CIL_0002NA_0002 CGP 13:54789377-55006018
CIL_0002N5 CIL_0002N5_0002 CGP 13:54949411-55021385

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0006915 IEA apoptotic process
GO:0007165 IEA signal transduction
GO:0016021 IEA integral component of membrane
GO:0033564 IMP anterior/posterior axon guidance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329542 UNC5A-001 protein_coding Homo_sapiens 0 4654
ENST00000509580 UNC5A-003 protein_coding Homo_sapiens 0 750
ENST00000513890 UNC5A-002 nonsense_mediated_decay Homo_sapiens 0 1122

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