C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibronectin leucine rich transmembrane protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110057 Flrt3-001 ENSMUSG00000051379 10090 - 2:140658198-140671469 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110057
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110057 0.799±0.39 0.287±0.12 6.071±0.66 4.272±1.14 0.884±0.29 2.004±0.41 0.035±0.01 0.768±0.10 0.185±0.07 6.919±0.76 0.059±0.05 0.782±0.33 2.573±0.70 0.163±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DE CIL_0002DE_0002 CGP 2:140229855-142392966
CIL_0002DF CIL_0002DF_0002 CGP 2:140395309-142392966
CIL_0002DG CIL_0002DG_0002 CGP 2:140650914-142901531

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0007411 ISO axon guidance
GO:0016021 IEA integral component of membrane
GO:0045499 IDA chemorepellent activity
GO:0050919 IDA negative chemotaxis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000143703 flrt3-001 protein_coding Danio_rerio 4e-22 111
ENST00000341420 FLRT3-003 protein_coding Homo_sapiens 0 3753
ENST00000378053 FLRT3-001 protein_coding Homo_sapiens 0 3489

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