C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 144B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110111 Rnf144b-202 ENSMUSG00000038068 10090 + 13:47194003-47247991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110111
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110111 6.867±1.40 1.970±0.62 22.827±0.30 0.925±0.66 5.441±0.28 1.649±0.38 3.513±0.19 1.486±0.09 6.245±4.75 10.762±0.15 5.672±0.88 8.533±2.62 4.351±1.48 7.220±2.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090E CIL_00090E_0002 VISTA 13:46584783-47186478
CIL_0008X6 CIL_0008X6_0002 VISTA 13:47010584-47612217
CIL_0007V4 CIL_0007V4_0002 VISTA 13:47067148-47669233
CIL_00041Y CIL_00041Y_0002 CGP 13:47084775-47247991
CIL_00086E CIL_00086E_0002 VISTA 13:47097122-47698796
CIL_00041X CIL_00041X_0002 CGP 13:47122720-48264036

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 ISS cytoplasm
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0031966 ISS mitochondrial membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259939 RNF144B-001 protein_coding Homo_sapiens 0 1016

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