C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prospero homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110249 Prox2-001 ENSMUSG00000042320 10090 - 12:85086814-85106431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000110249
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000110249 0.466±0.09 0.385±0.13 0.265±0.03 0.256±0.00 0.271±0.01 0.141±0.04 0.361±0.19 0.240±0.12 0.275±0.10 0.152±0.05 0.661±0.31 0.157±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003U2 CIL_0003U2_0002 CGP 12:84996321-85106431
CIL_0004KC CIL_0004KC_0003 CGP 12:85086385-85134091

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000554107 YLPM1-010 protein_coding Homo_sapiens 0 200
ENST00000556084 PROX2-001 protein_coding Homo_sapiens 0 350
ENST00000556489 PROX2-201 protein_coding Homo_sapiens 0 684

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