C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110316 Galnt7-002 ENSMUSG00000031608 10090 - 8:57524700-57653003 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110316
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110316 1.113±0.69 1.262±0.05 1.084±0.00 0.848±0.38 5.944±1.26 0.512±0.07 0.725±0.22 0.523±0.17 0.609±0.22 0.196±0.03 2.027±0.86 1.877±0.97 1.311±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BZ CIL_0008BZ_0002 VISTA 8:57035224-57635792
CIL_0008VG CIL_0008VG_0002 VISTA 8:57047180-57651136

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004653 IDA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006493 IDA protein O-linked glycosylation
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265000 GALNT7-001 protein_coding Homo_sapiens 0 2988
ENST00000502407 GALNT7-007 processed_transcript Homo_sapiens 0 399
ENST00000503213 GALNT7-005 protein_coding Homo_sapiens 0 682
ENST00000505308 GALNT7-003 protein_coding Homo_sapiens 0 2111
ENST00000506317 GALNT7-006 retained_intron Homo_sapiens 0 453
ENST00000512285 GALNT7-004 protein_coding Homo_sapiens 0 1755
ENST00000515862 GALNT7-002 retained_intron Homo_sapiens 0 948

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