C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase long-chain family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110372 Acsl1-002 ENSMUSG00000018796 10090 + 8:46490974-46535581 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110372
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110372 2.416±0.00 30.450±0.00 1.124±0.00 100.265±7.78 50.495±3.23 31.302±21.43 4.559±0.19 8.737±0.77 3.878±0.00 1.106±0.00 59.846±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097G CIL_00097G_0002 VISTA 8:46470571-47072246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001676 IEA long-chain fatty acid metabolic process
GO:0004467 IEA long-chain fatty acid-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0016021 IEA integral component of membrane
GO:0033211 IMP adiponectin-activated signaling pathway
GO:0071902 IMP positive regulation of protein serine/threonine kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281455 ACSL1-001 protein_coding Homo_sapiens 0 2447
ENST00000296869 ACSL6-009 protein_coding Homo_sapiens 0 320
ENST00000357096 ACSL6-201 protein_coding Homo_sapiens 0 320
ENST00000379240 ACSL6-004 protein_coding Homo_sapiens 0 320
ENST00000379244 ACSL6-008 protein_coding Homo_sapiens 0 320
ENST00000379246 ACSL6-002 protein_coding Homo_sapiens 0 320
ENST00000379255 ACSL6-003 protein_coding Homo_sapiens 0 320
ENST00000379264 ACSL6-001 protein_coding Homo_sapiens 0 320
ENST00000413683 ACSL6-006 nonsense_mediated_decay Homo_sapiens 0 320
ENST00000431707 ACSL6-018 protein_coding Homo_sapiens 0 320
ENST00000454703 ACSL1-005 protein_coding Homo_sapiens 0 2230
ENST00000493861 ACSL6-010 retained_intron Homo_sapiens 0 320
ENST00000503407 ACSL1-009 protein_coding Homo_sapiens 0 822
ENST00000504342 ACSL1-002 protein_coding Homo_sapiens 0 2254
ENST00000504900 ACSL1-004 protein_coding Homo_sapiens 0 1166
ENST00000505492 ACSL1-008 protein_coding Homo_sapiens 1.96182e-44 182
ENST00000506733 ACSL1-003 nonsense_mediated_decay Homo_sapiens 0 1975
ENST00000507295 ACSL1-006 protein_coding Homo_sapiens 0 1914
ENST00000513001 ACSL1-010 retained_intron Homo_sapiens 0 544
ENST00000513317 ACSL1-007 protein_coding Homo_sapiens 0 2268
ENST00000515030 ACSL1-011 protein_coding Homo_sapiens 0 2447
ENST00000543479 ACSL6-202 protein_coding Homo_sapiens 0 320
ENST00000622937 ACSL1-201 protein_coding Homo_sapiens 0 2156

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