| Transcript ID | Brain | Colon | Kidney | Placenta |
|---|---|---|---|---|
| ENSMUST00000110687 | 5.699±0.00 | 0.573±0.00 | 0.716±0.13 | 0.493±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Ral GTPase activating protein, alpha subunit 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000110687  |
Ralgapa1-202 |
ENSMUSG00000021027 |
10090 | - |
12:55602929-55821167  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008MF | CIL_0008MF_0002 | VISTA | 12:55314270-55915258 |
| CIL_0008ME | CIL_0008ME_0002 | VISTA | 12:55343542-55944223 |
| CIL_0007LS | CIL_0007LS_0003 | UCNEbase | 12:55566857-57467023 |
| CIL_00045O | CIL_00045O_0002 | CGP | 12:55598917-55821167 |
| CIL_00045N | CIL_00045N_0002 | CGP | 12:55602929-55869735 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0006355 | IDA | regulation of transcription, DNA-templated |
| GO:0017123 | ISS | Ral GTPase activator activity |
| GO:0032859 | ISS | activation of Ral GTPase activity |
| GO:0046982 | IEA | protein heterodimerization activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000202677
|
RALGAPA2-008 | protein_coding | Homo_sapiens | 1e-33 | 150 |
|
ENST00000307138
|
RALGAPA1-001 | protein_coding | Homo_sapiens | 0 | 8296 |
|
ENST00000382366
|
RALGAPA1-003 | protein_coding | Homo_sapiens | 0 | 4946 |
|
ENST00000389698
|
RALGAPA1-002 | protein_coding | Homo_sapiens | 0 | 8737 |
|
ENST00000443361
|
RALGAPA1P-001 | processed_pseudogene | Homo_sapiens | 0 | 7989 |
|
ENST00000553892
|
RALGAPA1-007 | protein_coding | Homo_sapiens | 0 | 5193 |
|
ENST00000553917
|
RALGAPA1-012 | retained_intron | Homo_sapiens | 0 | 640 |
|
ENST00000554259
|
RALGAPA1-019 | protein_coding | Homo_sapiens | 0 | 2680 |
|
ENST00000554355
|
RALGAPA1-015 | retained_intron | Homo_sapiens | 0 | 505 |
|
ENST00000554573
|
RALGAPA1-006 | protein_coding | Homo_sapiens | 0 | 1328 |
|
ENST00000554652
|
RALGAPA1-005 | retained_intron | Homo_sapiens | 0 | 2342 |
|
ENST00000554704
|
RALGAPA1-018 | processed_transcript | Homo_sapiens | 0 | 2300 |
|
ENST00000556106
|
RALGAPA1-017 | processed_transcript | Homo_sapiens | 0 | 403 |
|
ENST00000556192
|
RALGAPA1-021 | processed_transcript | Homo_sapiens | 2.8026e-45 | 185 |
|
ENST00000556837
|
RALGAPA1-016 | processed_transcript | Homo_sapiens | 0 | 357 |
|
ENST00000556839
|
RALGAPA1-011 | retained_intron | Homo_sapiens | 0 | 985 |
|
ENST00000557069
|
RALGAPA1-010 | retained_intron | Homo_sapiens | 0 | 501 |
|
ENST00000557104
|
RALGAPA1-009 | retained_intron | Homo_sapiens | 0 | 368 |
