C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldo-keto reductase family 1, member C18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110704 Akr1c18-002 ENSMUSG00000021214 10090 - 13:4132615-4150628 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungMuscleOvaryPlacentaENSMUST00000110704
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000110704 0.173±0.07 28.166±4.14 0.907±0.00 0.100±0.00 0.378±0.00 0.078±0.00 0.144±0.07 0.042±0.00 38.257±54.19 0.312±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002HN CIL_0002HN_0005 CGP 13:4049011-4150654

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006709 IDA progesterone catabolic process
GO:0007567 IMP parturition
GO:0047006 IDA 17-alpha,20-alpha-dihydroxypregn-4-en-3-one dehydrogenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380554 AKR1C3-001 protein_coding Homo_sapiens 0 438
ENST00000380753 AKR1C2-001 protein_coding Homo_sapiens 0 420
ENST00000380859 AKR1C1-004 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000380872 AKR1C1-001 protein_coding Homo_sapiens 0 420
ENST00000407674 AKR1C2-201 protein_coding Homo_sapiens 0 407
ENST00000421196 AKR1C2-003 protein_coding Homo_sapiens 0 649
ENST00000434459 AKR1C1-201 protein_coding Homo_sapiens 0 409
ENST00000439082 AKR1C3-201 protein_coding Homo_sapiens 0 438
ENST00000442997 AKR1C1-003 protein_coding Homo_sapiens 0 344
ENST00000460124 AKR1C2-002 retained_intron Homo_sapiens 0 420
ENST00000477661 AKR1C1-002 processed_transcript Homo_sapiens 0 420
ENST00000602997 AKR1C3-008 protein_coding Homo_sapiens 1e-24 117
ENST00000604507 AKR1C2-007 protein_coding Homo_sapiens 0 191
ENST00000605149 AKR1C3-006 protein_coding Homo_sapiens 0 438
ENST00000605322 AKR1C3-005 retained_intron Homo_sapiens 3.00018e-42 176
ENST00000605781 AKR1C3-007 processed_transcript Homo_sapiens 0 248

Loading