C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytohesin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110727 Cyth3-002 ENSMUSG00000018001 10090 + 5:143651241-143708256 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverTestisENSMUST00000110727
Transcript ID Colon Liver Testis
ENSMUST00000110727 3.073±0.00 0.253±0.00 4.991±1.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RJ CIL_0006RJ_0002 CGP 5:143622447-143732280

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IPI ruffle
GO:0005085 ISS guanyl-nucleotide exchange factor activity
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0005547 IDA phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0045785 IDA positive regulation of cell adhesion
GO:0090162 IMP establishment of epithelial cell polarity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000028022 cyth4b-201 protein_coding Danio_rerio 0 425
ENST00000350796 CYTH3-001 protein_coding Homo_sapiens 0 1402
ENST00000391881 CYTH2-004 nonsense_mediated_decay Homo_sapiens 0 819
ENST00000396741 CYTH3-201 protein_coding Homo_sapiens 0 1393
ENST00000452733 CYTH2-001 protein_coding Homo_sapiens 0 837
ENST00000482460 CYTH3-002 processed_transcript Homo_sapiens 6e-28 128
ENST00000493260 CYTH2-002 retained_intron Homo_sapiens 0 339
ENST00000495176 CYTH3-004 retained_intron Homo_sapiens 0 300

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