C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scavenger receptor cysteine rich family, 4 domains
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111150 Srcrb4d-004 ENSMUSG00000029699 10090 - 5:135960822-135962271 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111150
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111150 3.071±0.00 4.066±0.71 2.957±1.23 2.298±0.00 0.466±0.00 0.831±0.00 1.503±0.28 0.919±0.17 0.638±0.14 2.657±0.00 2.094±0.00 0.292±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006E6 CIL_0006E6_0002 CGP 5:135908409-135974531
CIL_0006E7 CIL_0006E7_0002 CGP 5:135960211-135988624

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0006898 IEA receptor-mediated endocytosis
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275560 SSC4D-001 protein_coding Homo_sapiens 0 359
ENST00000492979 SSC4D-003 processed_transcript Homo_sapiens 0 359

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