C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear pore membrane protein 121
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111171 Pom121-001 ENSMUSG00000053293 10090 - 5:135376141-135394546 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111171
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111171 5.321±1.67 11.372±0.39 4.971±0.68 9.300±3.03 7.516±2.55 8.454±1.45 3.605±0.69 4.432±0.32 4.346±2.87 6.706±1.01 2.966±0.48 9.362±2.08 9.463±6.01 24.138±15.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UT CIL_0005UT_0002 CGP 5:135353295-135376805
CIL_0005SR CIL_0005SR_0002 CGP 5:135369953-135394546

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005643 IEA nuclear pore
GO:0005783 IEA endoplasmic reticulum
GO:0015031 IEA protein transport
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358357 POM121-002 protein_coding Homo_sapiens 0 560
ENST00000380760 POM121B-001 unprocessed_pseudogene Homo_sapiens 0 403
ENST00000428206 NSUN5-005 protein_coding Homo_sapiens 0 244
ENST00000434423 POM121-001 protein_coding Homo_sapiens 0 425
ENST00000607367 POM121C-003 protein_coding Homo_sapiens 0 436
ENST00000614583 POM121C-004 retained_intron Homo_sapiens 0 560
ENST00000615331 POM121C-001 protein_coding Homo_sapiens 0 560

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