C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: branched chain aminotransferase 1, cytosolic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111742 Bcat1-002 ENSMUSG00000030268 10090 - 6:144999158-145076184 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111742
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111742 6.933±6.78 0.351±0.15 0.683±0.21 8.391±3.32 0.633±0.07 0.086±0.02 0.146±0.05 4.560±0.43 0.101±0.05 0.079±0.01 0.046±0.02 36.811±35.43 20.477±17.49 0.093±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XB CIL_0004XB_0002 CGP 6:143828425-145076184
CIL_0008XB CIL_0008XB_0002 VISTA 6:144644642-145246014

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004084 IDA branched-chain-amino-acid transaminase activity
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0009082 IEA branched-chain amino acid biosynthetic process
GO:0009083 IDA branched-chain amino acid catabolic process
GO:0031571 ISA mitotic G1 DNA damage checkpoint
GO:0034644 ISA cellular response to UV
GO:0052654 IEA L-leucine transaminase activity
GO:0052655 IEA L-valine transaminase activity
GO:0052656 IEA L-isoleucine transaminase activity

Homologs

No Homologs available.

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