C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111956 Arhgap22-001 ENSMUSG00000063506 10090 + 14:33216823-33369934 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000111956
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000111956 0.297±0.00 0.687±0.00 1.158±0.18 1.379±0.00 0.497±0.23 0.534±0.07 0.183±0.02 0.570±0.00 0.106±0.00 0.071±0.02 1.101±0.29 3.147±1.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H4 CIL_0006H4_0002 CGP 14:32991382-33369934
CIL_0006H2 CIL_0006H2_0003 CGP 14:33214026-33447158

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005925 IEA focal adhesion
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007165 IEA signal transduction
GO:0030154 IEA cell differentiation
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000137809 arhgap24-001 protein_coding Danio_rerio 0 303
ENSDART00000084495 arhgap24-003 protein_coding Danio_rerio 0 303
ENSDART00000140795 arhgap24-002 nonsense_mediated_decay Danio_rerio 1e-16 94
ENST00000249601 ARHGAP22-001 protein_coding Homo_sapiens 0 1688
ENST00000374170 ARHGAP22-006 protein_coding Homo_sapiens 0 472
ENST00000374172 ARHGAP22-005 protein_coding Homo_sapiens 0 1192
ENST00000417247 ARHGAP22-003 protein_coding Homo_sapiens 0 1378
ENST00000417912 ARHGAP22-002 protein_coding Homo_sapiens 0 1192
ENST00000435790 ARHGAP22-004 protein_coding Homo_sapiens 0 1796
ENST00000460425 ARHGAP22-008 nonsense_mediated_decay Homo_sapiens 0 994
ENST00000471013 ARHGAP22-009 processed_transcript Homo_sapiens 0 388
ENST00000489984 ARHGAP22-014 processed_transcript Homo_sapiens 0 483
ENST00000493012 ARHGAP22-011 processed_transcript Homo_sapiens 0 292
ENST00000515523 ARHGAP22-015 processed_transcript Homo_sapiens 0 464

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