C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein light chain LC8-type 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112090 Dynll1-003 ENSMUSG00000009013 10090 - 5:115298505-115300912 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112090
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112090 25.693±8.17 10.096±1.68 121.139±29.32 93.609±29.16 30.539±11.93 10.942±1.68 10.587±3.55 15.511±3.60 42.198±43.43 17.415±3.95 11.792±3.51 33.548±37.00 112.302±70.71 86.529±28.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 ISS kinetochore
GO:0003774 IEA motor activity
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0005829 IDA cytosol
GO:0005856 IDA cytoskeleton
GO:0005868 ISS cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006810 IEA transport
GO:0006915 IEA apoptotic process
GO:0007018 TAS microtubule-based movement
GO:0008022 IPI protein C-terminus binding
GO:0016020 IDA membrane
GO:0019904 IPI protein domain specific binding
GO:0072686 ISS mitotic spindle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242577 DYNLL1-001 protein_coding Homo_sapiens 0 614
ENST00000392508 DYNLL1-003 protein_coding Homo_sapiens 0 616
ENST00000392509 DYNLL1-006 protein_coding Homo_sapiens 0 617
ENST00000429273 DYNLL1P7-001 processed_pseudogene Homo_sapiens 0 302
ENST00000467158 DYNLL1P5-001 processed_pseudogene Homo_sapiens 5e-40 167
ENST00000548214 DYNLL1-007 protein_coding Homo_sapiens 0 209
ENST00000548342 DYNLL1-004 protein_coding Homo_sapiens 0 457
ENST00000549649 DYNLL1-005 protein_coding Homo_sapiens 0 195
ENST00000549989 DYNLL1-008 protein_coding Homo_sapiens 0 590
ENST00000550178 DYNLL1-010 protein_coding Homo_sapiens 0 211
ENST00000550845 DYNLL1-002 protein_coding Homo_sapiens 0 211
ENST00000552316 DYNLL1-011 processed_transcript Homo_sapiens 0 411
ENST00000552870 DYNLL1-009 protein_coding Homo_sapiens 0 363
ENST00000554807 DYNLL1P2-001 processed_pseudogene Homo_sapiens 0 322
ENST00000595442 DYNLL1P1-001 processed_pseudogene Homo_sapiens 0 337
ENST00000596113 DYNLL1P3-001 processed_pseudogene Homo_sapiens 0 292

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