C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112384 Rps24-201 ENSMUSG00000025290 10090 + 14:24490681-24495432 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112384
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112384 459.793±154.01 35.372±11.87 1695.065±142.63 613.710±234.38 535.799±188.91 396.797±67.67 342.438±11.50 365.775±20.21 842.138±768.63 325.305±10.75 172.536±64.01 551.808±549.99 958.098±471.83 606.300±49.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A5 CIL_0008A5_0002 VISTA 14:24316748-24920772
CIL_00084G CIL_00084G_0002 VISTA 14:24346755-24947117
CIL_00084G CIL_00084G_0003 VISTA 14:24347117-24947691
CIL_00084G CIL_00084G_0004 VISTA 14:24347693-24948412
CIL_00084G CIL_00084G_0005 VISTA 14:24348412-24949277
CIL_000809 CIL_000809_0002 VISTA 14:24349772-24952271
CIL_0007IB CIL_0007IB_0002 CGP 14:24448694-24496146
CIL_0007AW CIL_0007AW_0003 CGP 14:24490681-25666743

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000462 IBA maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003735 ISO structural constituent of ribosome
GO:0005730 IBA nucleolus
GO:0006412 ISO translation
GO:0006414 IBA translational elongation
GO:0015935 ISS small ribosomal subunit
GO:0022627 IBA cytosolic small ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360830 RPS24-003 protein_coding Homo_sapiens 0 516
ENST00000372360 RPS24-001 protein_coding Homo_sapiens 0 510
ENST00000424289 RP11-52I18.1-001 processed_pseudogene Homo_sapiens 0 337
ENST00000426577 RP3-417G15.1-001 processed_pseudogene Homo_sapiens 0 398
ENST00000431490 RPS24P8-001 processed_pseudogene Homo_sapiens 0 440
ENST00000435275 RPS24-201 protein_coding Homo_sapiens 0 523
ENST00000440692 RPS24-202 protein_coding Homo_sapiens 0 525
ENST00000444423 RP11-543E8.2-001 processed_pseudogene Homo_sapiens 0 364
ENST00000464716 RPS24-007 processed_transcript Homo_sapiens 0 510
ENST00000465692 RPS24-008 processed_transcript Homo_sapiens 0 494
ENST00000466129 RPS24-005 retained_intron Homo_sapiens 0 355
ENST00000473603 RP1-89D4.1-001 processed_pseudogene Homo_sapiens 0 427
ENST00000475468 RPS24-004 processed_transcript Homo_sapiens 0 268
ENST00000476545 RPS24-009 processed_transcript Homo_sapiens 0 510
ENST00000478655 RPS24-006 retained_intron Homo_sapiens 0 510
ENST00000482069 RPS24-010 processed_transcript Homo_sapiens 0 496
ENST00000485708 RPS24-002 processed_transcript Homo_sapiens 0 510
ENST00000613865 RPS24-203 protein_coding Homo_sapiens 0 523

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