C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: checkpoint with forkhead and ring finger domains
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112519 Chfr-202 ENSMUSG00000014668 10090 + 5:110135840-110171972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112519
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112519 3.886±1.25 7.573±2.77 6.618±0.96 18.694±1.39 7.316±1.59 10.256±1.26 2.102±0.72 3.607±0.96 5.049±1.94 4.185±1.97 2.894±1.08 5.822±1.35 9.707±4.08 10.393±5.82

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 ISS nucleotide binding
GO:0000209 IDA protein polyubiquitination
GO:0000278 IMP mitotic cell cycle
GO:0004842 IMP ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006511 IDA ubiquitin-dependent protein catabolic process
GO:0007067 IEA mitotic nuclear division
GO:0007093 ISS mitotic cell cycle checkpoint
GO:0008270 IEA zinc ion binding
GO:0016605 ISS PML body
GO:0016874 IEA ligase activity
GO:0019941 IEA modification-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266880 CHFR-001 protein_coding Homo_sapiens 0 1286
ENST00000315585 CHFR-010 nonsense_mediated_decay Homo_sapiens 0 451
ENST00000432561 CHFR-002 protein_coding Homo_sapiens 0 1801
ENST00000443047 CHFR-004 protein_coding Homo_sapiens 0 1286
ENST00000450056 CHFR-003 protein_coding Homo_sapiens 0 1352
ENST00000499045 CHFR-011 processed_transcript Homo_sapiens 1e-24 117
ENST00000535181 CHFR-016 retained_intron Homo_sapiens 0 342
ENST00000535527 CHFR-021 nonsense_mediated_decay Homo_sapiens 0 549
ENST00000536196 CHFR-017 processed_transcript Homo_sapiens 0 355
ENST00000536843 CHFR-008 retained_intron Homo_sapiens 0 451
ENST00000536932 CHFR-027 protein_coding Homo_sapiens 0 305
ENST00000537551 CHFR-015 processed_transcript Homo_sapiens 0 379
ENST00000538235 CHFR-022 processed_transcript Homo_sapiens 0 549
ENST00000540537 CHFR-005 protein_coding Homo_sapiens 0 303
ENST00000540963 CHFR-014 protein_coding Homo_sapiens 0 381
ENST00000541341 CHFR-028 retained_intron Homo_sapiens 0 451
ENST00000541817 CHFR-012 protein_coding Homo_sapiens 0 303
ENST00000542714 CHFR-013 protein_coding Homo_sapiens 0 431
ENST00000544093 CHFR-020 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000544268 CHFR-007 retained_intron Homo_sapiens 0 383
ENST00000545046 CHFR-009 retained_intron Homo_sapiens 0 383

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