C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | secreted phosphoprotein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000112746  |
Spp1-005 |
ENSMUSG00000029304 |
10090 | + |
5:104435139-104439542  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000BJ | CIL_0000BJ_0002 | CGP | 5:104325329-104441050 |
| CIL_0000BK | CIL_0000BK_0002 | CGP | 5:104435118-104505819 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001503 | IEA | ossification |
| GO:0005737 | IDA | cytoplasm |
| GO:0007155 | IEA | cell adhesion |
| GO:0010811 | IDA | positive regulation of cell-substrate adhesion |
| GO:0030593 | IDA | neutrophil chemotaxis |
| GO:0045177 | IDA | apical part of cell |
| GO:0050840 | IDA | extracellular matrix binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000237623
|
SPP1-002 | protein_coding | Homo_sapiens | 1e-28 | 132 |
|
ENST00000395080
|
SPP1-001 | protein_coding | Homo_sapiens | 0 | 252 |
|
ENST00000505146
|
SPP1-011 | retained_intron | Homo_sapiens | 7e-29 | 130 |
|
ENST00000508002
|
SPP1-006 | retained_intron | Homo_sapiens | 9.80909e-45 | 183 |
|
ENST00000509334
|
SPP1-009 | processed_transcript | Homo_sapiens | 0.0000000000008 | 79 |
|
ENST00000509659
|
SPP1-004 | processed_transcript | Homo_sapiens | 0 | 198 |
|
ENST00000513981
|
SPP1-008 | processed_transcript | Homo_sapiens | 0 | 196 |
|
ENST00000614857
|
SPP1-201 | protein_coding | Homo_sapiens | 0 | 244 |
