C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | transcription factor EB | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000113284  |
Tfeb-011 |
ENSMUSG00000023990 |
10090 | + |
17:47738903-47789070  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000963 | CIL_000963_0002 | VISTA | 17:47571879-48173076 |
| CIL_00093V | CIL_00093V_0002 | VISTA | 17:47614773-48215356 |
| CIL_0008XI | CIL_0008XI_0002 | VISTA | 17:47688296-48291797 |
| CIL_0008IB | CIL_0008IB_0002 | VISTA | 17:47708185-48309224 |
| CIL_0007QG | CIL_0007QG_0002 | VISTA | 17:47710565-48311720 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IDA | DNA binding |
| GO:0005667 | IDA | transcription factor complex |
| GO:0006959 | IEA | humoral immune response |
| GO:0045893 | IDA | positive regulation of transcription, DNA-templated |
| GO:0046983 | IEA | protein dimerization activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000230323
|
TFEB-001 | protein_coding | Homo_sapiens | 0 | 1048 |
|
ENST00000315869
|
TFE3-001 | protein_coding | Homo_sapiens | 5e-16 | 92 |
|
ENST00000343317
|
TFEB-015 | protein_coding | Homo_sapiens | 0 | 1037 |
|
ENST00000358871
|
TFEB-010 | protein_coding | Homo_sapiens | 0 | 1040 |
|
ENST00000373033
|
TFEB-005 | protein_coding | Homo_sapiens | 0 | 1037 |
|
ENST00000394283
|
TFEB-004 | protein_coding | Homo_sapiens | 0 | 1061 |
|
ENST00000403298
|
TFEB-201 | protein_coding | Homo_sapiens | 0 | 1037 |
|
ENST00000406563
|
TFEB-003 | protein_coding | Homo_sapiens | 0 | 470 |
|
ENST00000416140
|
TFEB-008 | protein_coding | Homo_sapiens | 0 | 935 |
|
ENST00000419396
|
TFEB-006 | protein_coding | Homo_sapiens | 0 | 1035 |
|
ENST00000419574
|
TFEB-002 | protein_coding | Homo_sapiens | 0 | 830 |
|
ENST00000420312
|
TFEB-202 | protein_coding | Homo_sapiens | 0 | 470 |
|
ENST00000424495
|
TFEB-014 | protein_coding | Homo_sapiens | 0 | 333 |
|
ENST00000425401
|
TFEB-011 | protein_coding | Homo_sapiens | 3e-37 | 158 |
|
ENST00000445214
|
TFEB-009 | protein_coding | Homo_sapiens | 0 | 283 |
|
ENST00000487451
|
TFE3-006 | processed_transcript | Homo_sapiens | 1e-16 | 92 |
|
ENST00000493583
|
TFE3-004 | nonsense_mediated_decay | Homo_sapiens | 5e-16 | 92 |
|
ENST00000494822
|
TFEB-007 | retained_intron | Homo_sapiens | 0 | 207 |
