C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cleavage stimulation factor, 3' pre-RNA subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113287 Cstf2-002 ENSMUSG00000031256 10090 + X:134059187-134086046 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000113287
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000113287 1.560±0.35 2.796±0.29 1.252±0.00 10.666±0.00 1.295±0.28 2.652±0.00 0.820±0.26 1.090±0.17 1.581±0.78 0.560±0.11 3.584±1.21 4.321±2.01 1.782±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BC CIL_0007BC_0002 CGP X:133936385-134086819
CIL_0000YO CIL_0000YO_0003 CGP X:134059187-134221956

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372972 CSTF2-001 protein_coding Homo_sapiens 0 1214
ENST00000413437 CSTF2-004 protein_coding Homo_sapiens 0 931
ENST00000415585 CSTF2-201 protein_coding Homo_sapiens 0 1238
ENST00000475126 CSTF2-003 nonsense_mediated_decay Homo_sapiens 0 1003

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