C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translocase of outer mitochondrial membrane 6 homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113302 Tomm6-001 ENSMUSG00000033475 10090 - 17:47686646-47688183 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000113302
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000113302 43.799±14.39 32.197±6.33 37.834±0.75 35.196±5.87 23.017±4.00 16.567±1.56 33.934±6.46 29.142±7.07 18.518±2.52 47.577±3.81 62.550±26.18 72.172±26.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000963 CIL_000963_0002 VISTA 17:47571879-48173076
CIL_0006L6 CIL_0006L6_0002 CGP 17:47611589-47686738
CIL_00093V CIL_00093V_0002 VISTA 17:47614773-48215356

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005742 IEA mitochondrial outer membrane translocase complex
GO:0008150 ND biological_process
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335515 PRICKLE4-001 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000398881 TOMM6-002 protein_coding Homo_sapiens 0 250
ENST00000398884 TOMM6-001 protein_coding Homo_sapiens 0 219
ENST00000456057 PRICKLE4-002 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000487182 PRICKLE4-003 retained_intron Homo_sapiens 0 250
ENST00000604597 RP11-712C19.1-001 processed_pseudogene Homo_sapiens 7e-29 130

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