C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) binding protein, cytoplasmic 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113366 Pabpc5-002 ENSMUSG00000034732 10090 + X:119927225-119930009 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000113366
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000113366 0.131±0.06 0.034±0.00 0.289±0.00 0.120±0.03 0.085±0.00 0.022±0.00 0.111±0.05 0.008±0.00 0.076±0.00 0.091±0.07 0.005±0.00 0.059±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007B7 CIL_0007B7_0002 CGP X:118479708-119930165
CIL_0007B8 CIL_0007B8_0002 CGP X:119927196-120910619

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312600 PABPC5-001 protein_coding Homo_sapiens 0 1629
ENST00000373105 PABPC5-002 protein_coding Homo_sapiens 0 887

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