C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113548 Spata18-203 ENSMUSG00000029155 10090 + 5:73657535-73679482 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000113548
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000113548 0.044±0.02 0.006±0.00 0.254±0.00 0.036±0.01 0.222±0.00 0.057±0.03 0.016±0.01 3.621±1.00 0.030±0.00 2.906±1.18 0.008±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CP CIL_0001CP_0002 CGP 5:73632749-73679484
CIL_0001CQ CIL_0001CQ_0002 CGP 5:73651380-74068430

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005741 IEA mitochondrial outer membrane
GO:0033554 IEA cellular response to stress

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295213 SPATA18-001 protein_coding Homo_sapiens 0 771
ENST00000419395 SPATA18-002 protein_coding Homo_sapiens 0 771
ENST00000505320 SPATA18-004 nonsense_mediated_decay Homo_sapiens 0 656
ENST00000511028 SPATA18-003 retained_intron Homo_sapiens 0 656

Loading