C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: K(lysine) acetyltransferase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113641 Kat5-201 ENSMUSG00000024926 10090 - 19:5603017-5610094 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113641
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113641 13.642±2.57 11.608±2.56 15.288±1.30 31.888±2.27 11.749±1.68 11.272±1.13 7.811±1.40 11.820±3.38 10.389±5.33 12.952±4.65 4.320±1.13 14.794±3.81 14.783±2.60 15.781±7.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000785 IEA chromatin
GO:0000812 ISS Swr1 complex
GO:0003713 ISS transcription coactivator activity
GO:0004402 ISS histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005667 IDA transcription factor complex
GO:0005730 ISS nucleolus
GO:0005829 IEA cytosol
GO:0006302 IEA double-strand break repair
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006978 ISS DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0008134 IEA transcription factor binding
GO:0010212 IEA response to ionizing radiation
GO:0016573 IEA histone acetylation
GO:0032403 IEA protein complex binding
GO:0032703 IEA negative regulation of interleukin-2 production
GO:0032777 ISS Piccolo NuA4 histone acetyltransferase complex
GO:0035267 ISS NuA4 histone acetyltransferase complex
GO:0040008 IEA regulation of growth
GO:0043161 IEA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043234 IEA protein complex
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0070491 IEA repressing transcription factor binding
GO:0071392 IEA cellular response to estradiol stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308418 RNASEH2C-001 protein_coding Homo_sapiens 0 305
ENST00000341318 KAT5-001 protein_coding Homo_sapiens 0 2242
ENST00000352980 KAT5-003 protein_coding Homo_sapiens 0 1572
ENST00000377046 KAT5-002 protein_coding Homo_sapiens 0 2359
ENST00000525204 KAT5-017 processed_transcript Homo_sapiens 0 673
ENST00000525600 KAT5-008 retained_intron Homo_sapiens 0 353
ENST00000527544 KAT5-010 retained_intron Homo_sapiens 0 652
ENST00000528198 KAT5-015 protein_coding Homo_sapiens 0 442
ENST00000530446 KAT5-004 protein_coding Homo_sapiens 0 1469
ENST00000530605 KAT5-018 protein_coding Homo_sapiens 0 769
ENST00000531596 RNASEH2C-006 nonsense_mediated_decay Homo_sapiens 1e-36 158
ENST00000531880 KAT5-016 protein_coding Homo_sapiens 0 1086
ENST00000532042 KAT5-012 retained_intron Homo_sapiens 0 529
ENST00000533441 KAT5-007 retained_intron Homo_sapiens 0 302
ENST00000533596 KAT5-009 protein_coding Homo_sapiens 0 403
ENST00000533698 RNASEH2C-007 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000534104 KAT5-014 protein_coding Homo_sapiens 0 412
ENST00000534293 KAT5-011 processed_transcript Homo_sapiens 0 346
ENST00000534650 KAT5-005 protein_coding Homo_sapiens 0 1572
ENST00000534681 KAT5-013 protein_coding Homo_sapiens 0 472

Loading