C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: outer dense fiber of sperm tails 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113759 Odf2-003 ENSMUSG00000026790 10090 + 2:29889817-29931745 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleOvaryPlacentaENSMUST00000113759
Transcript ID Breast Liver Muscle Ovary Placenta
ENSMUST00000113759 1.969±0.00 3.563±1.50 0.919±0.48 3.087±1.14 2.283±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E9 CIL_0007E9_0002 CGP 2:29869164-29931746
CIL_0007EC CIL_0007EC_0002 CGP 2:29889221-29960371

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001520 IEA outer dense fiber
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005813 IEA centrosome
GO:0005814 IDA centriole
GO:0005874 IEA microtubule
GO:0005929 IDA cilium
GO:0007275 IEA multicellular organismal development
GO:0007286 IEA spermatid development
GO:0017137 IEA Rab GTPase binding
GO:0036064 IEA ciliary basal body
GO:0072372 IEA primary cilium
GO:1902017 IEA regulation of cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000351030 ODF2-201 protein_coding Homo_sapiens 0 3640
ENST00000372791 ODF2-006 protein_coding Homo_sapiens 0 2172
ENST00000372807 ODF2-009 protein_coding Homo_sapiens 0 3286
ENST00000372814 ODF2-008 protein_coding Homo_sapiens 0 2375
ENST00000393527 ODF2-005 protein_coding Homo_sapiens 0 2924
ENST00000393533 ODF2-018 protein_coding Homo_sapiens 0 2375
ENST00000421776 ODF2-020 protein_coding Homo_sapiens 0 1197
ENST00000432065 ODF2-012 protein_coding Homo_sapiens 0 569
ENST00000434106 ODF2-011 protein_coding Homo_sapiens 0 3127
ENST00000444119 ODF2-002 protein_coding Homo_sapiens 0 2913
ENST00000444993 ODF2-010 retained_intron Homo_sapiens 0 385
ENST00000446274 ODF2-003 protein_coding Homo_sapiens 0 385
ENST00000448249 ODF2-004 protein_coding Homo_sapiens 0 1929
ENST00000469582 ODF2-001 retained_intron Homo_sapiens 0 813
ENST00000470061 ODF2-007 protein_coding Homo_sapiens 0 298
ENST00000483070 ODF2-015 protein_coding Homo_sapiens 0 411
ENST00000488909 ODF2-016 retained_intron Homo_sapiens 0 586
ENST00000497812 ODF2-014 protein_coding Homo_sapiens 0 507
ENST00000546203 ODF2-019 protein_coding Homo_sapiens 0 2172
ENST00000604420 ODF2-017 protein_coding Homo_sapiens 0 3127

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