C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caseinolytic mitochondrial matrix peptidase chaperone subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113824 Clpx-201 ENSMUSG00000015357 10090 + 9:65294295-65330658 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000113824
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000113824 3.309±0.90 22.780±4.86 2.501±0.00 3.855±2.50 10.168±2.07 4.440±1.26 4.916±0.89 4.665±1.15 13.537±9.42 1.955±0.68 6.163±3.93 12.020±7.25 19.269±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0002 VISTA 9:65081642-65684657

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IDA ATP binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0006200 IDA ATP catabolic process
GO:0006457 IEA protein folding
GO:0016887 IDA ATPase activity
GO:0051082 IEA unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300107 CLPX-001 protein_coding Homo_sapiens 0 2043
ENST00000558103 CLPX-006 retained_intron Homo_sapiens 0 222
ENST00000558958 CLPX-002 retained_intron Homo_sapiens 0 846
ENST00000559152 CLPX-003 nonsense_mediated_decay Homo_sapiens 0 1319
ENST00000559218 CLPX-005 protein_coding Homo_sapiens 0 448
ENST00000560166 CLPX-007 retained_intron Homo_sapiens 0 623

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