C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class P
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113910 Pigp-004 ENSMUSG00000022940 10090 - 16:94364447-94370694 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000113910
Transcript ID Muscle
ENSMUST00000113910 24.696±1.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CY CIL_0001CY_0003 CGP 16:94328420-94371015
CIL_0001CX CIL_0001CX_0003 CGP 16:94358763-94469222

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000506 ISO glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
GO:0005783 IDA endoplasmic reticulum
GO:0006506 IMP:IEA GPI anchor biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0017176 ISO phosphatidylinositol N-acetylglucosaminyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329667 PIGP-008 processed_transcript Homo_sapiens 4e-39 165
ENST00000360525 PIGP-001 protein_coding Homo_sapiens 0 497
ENST00000399098 PIGP-003 protein_coding Homo_sapiens 2e-40 171
ENST00000399102 PIGP-002 protein_coding Homo_sapiens 0 494
ENST00000399103 PIGP-005 protein_coding Homo_sapiens 0 501
ENST00000430792 PIGP-007 protein_coding Homo_sapiens 5e-40 169
ENST00000464265 PIGP-004 protein_coding Homo_sapiens 0 496
ENST00000479152 PIGP-006 retained_intron Homo_sapiens 0 243

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