C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sperm associated antigen 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113940 Spag16-002 ENSMUSG00000053153 10090 + 1:69826992-69926242 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000113940
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000113940 0.007±0.00 0.189±0.12 0.027±0.00 0.223±0.01 0.018±0.01 0.008±0.00 3.468±0.21 2.495±0.74 0.024±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PB CIL_0006PB_0002 CGP 1:69531214-70725132
CIL_0005MG CIL_0005MG_0002 CGP 1:69826970-70885397

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005930 IDA axoneme
GO:0007283 IMP spermatogenesis
GO:0015630 IDA microtubule cytoskeleton
GO:0019901 IPI protein kinase binding
GO:0031514 IEA motile cilium
GO:0042384 IDA cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272898 SPAG16-201 protein_coding Homo_sapiens 0 575
ENST00000331683 SPAG16-001 protein_coding Homo_sapiens 0 575
ENST00000414961 SPAG16-010 processed_transcript Homo_sapiens 0 385
ENST00000432529 SPAG16-002 protein_coding Homo_sapiens 0 342
ENST00000440779 SPAG16-009 nonsense_mediated_decay Homo_sapiens 9.99995e-41 171
ENST00000447990 SPAG16-006 protein_coding Homo_sapiens 0 575

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