C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: capping protein (actin filament), gelsolin-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114071 Capg-001 ENSMUSG00000056737 10090 + 6:72549273-72562983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMusclePlacentaTestisENSMUST00000114071
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Placenta Testis
ENSMUST00000114071 4.610±1.03 8.821±0.00 0.223±0.00 6.777±2.14 7.853±1.67 1.088±0.02 1.508±1.32 5.009±0.42 1.485±0.58 13.046±5.66 0.256±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AX CIL_0009AX_0002 VISTA 6:72353769-72955984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0030031 IDA cell projection assembly
GO:0031965 IEA nuclear membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263867 CAPG-001 protein_coding Homo_sapiens 0 1352
ENST00000409275 CAPG-012 protein_coding Homo_sapiens 0 843
ENST00000409670 CAPG-003 protein_coding Homo_sapiens 0 1349
ENST00000409724 CAPG-002 protein_coding Homo_sapiens 0 1315
ENST00000409921 CAPG-004 protein_coding Homo_sapiens 0 819
ENST00000415012 CAPG-009 processed_transcript Homo_sapiens 0 296
ENST00000439385 CAPG-005 protein_coding Homo_sapiens 0 966
ENST00000447219 CAPG-008 protein_coding Homo_sapiens 0 966
ENST00000449030 CAPG-011 protein_coding Homo_sapiens 0 968
ENST00000459793 CAPG-007 retained_intron Homo_sapiens 0 905
ENST00000471064 CAPG-015 retained_intron Homo_sapiens 0 351
ENST00000483659 CAPG-014 processed_transcript Homo_sapiens 0 900

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