C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: serologically defined colon cancer antigen 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114100 Sdccag3-005 ENSMUSG00000026927 10090 - 2:26382802-26389291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalTestisENSMUST00000114100
Transcript ID Adrenal Testis
ENSMUST00000114100 23.804±6.71 36.356±5.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E3 CIL_0002E3_0003 CGP 2:26362765-26389316
CIL_00034J CIL_00034J_0002 CGP 2:26382802-26397122

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298537 SDCCAG3-001 protein_coding Homo_sapiens 0 996
ENST00000326105 SDCCAG3P2-001 processed_pseudogene Homo_sapiens 0 736
ENST00000357365 SDCCAG3-002 protein_coding Homo_sapiens 0 252
ENST00000446833 SDCCAG3-006 protein_coding Homo_sapiens 0 215

Loading