C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coxsackie virus and adenovirus receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114229 Cxadr-002 ENSMUSG00000022865 10090 + 16:78301756-78359785 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonLungMuscleOvaryTestisENSMUST00000114229
Transcript ID Adipose Colon Lung Muscle Ovary Testis
ENSMUST00000114229 0.381±0.00 16.844±5.64 4.274±0.00 0.108±0.01 2.831±1.05 0.345±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ES CIL_0005ES_0002 CGP 16:78301496-78377192

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001669 IDA acrosomal vesicle
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005886 ISS plasma membrane
GO:0005911 IDA cell-cell junction
GO:0005912 ISS adherens junction
GO:0005923 IDA tight junction
GO:0007005 IMP mitochondrion organization
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007507 IMP heart development
GO:0008013 IPI beta-catenin binding
GO:0008354 IEP germ cell migration
GO:0010669 ISS epithelial structure maintenance
GO:0014704 IDA intercalated disc
GO:0016021 IEA integral component of membrane
GO:0016323 IDA basolateral plasma membrane
GO:0016327 ISS apicolateral plasma membrane
GO:0016337 IMP single organismal cell-cell adhesion
GO:0030165 ISS PDZ domain binding
GO:0030175 IDA filopodium
GO:0030426 IDA growth cone
GO:0030593 ISS neutrophil chemotaxis
GO:0031532 ISS actin cytoskeleton reorganization
GO:0034109 ISS homotypic cell-cell adhesion
GO:0043005 IDA neuron projection
GO:0044297 IDA cell body
GO:0045121 ISS membrane raft
GO:0045216 IMP cell-cell junction organization
GO:0046629 IDA gamma-delta T cell activation
GO:0048739 IMP cardiac muscle fiber development
GO:0050839 ISS cell adhesion molecule binding
GO:0060044 IMP negative regulation of cardiac muscle cell proliferation
GO:0060054 IC positive regulation of epithelial cell proliferation involved in wound healing
GO:0071253 IPI connexin binding
GO:0086067 IMP AV node cell to bundle of His cell communication

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000398098 CXADRP1-001 processed_pseudogene Homo_sapiens 0 845

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