C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114479 Atp2b3-002 ENSMUSG00000031376 10090 + X:73503086-73571005 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyOvaryTestisENSMUST00000114479
Transcript ID Adrenal Brain Colon Heart Kidney Ovary Testis
ENSMUST00000114479 6.322±2.29 1.590±0.63 0.131±0.04 0.037±0.01 0.051±0.02 1.292±0.66 0.427±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001V0 CIL_0001V0_0002 CGP X:73483602-73571005

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000093117 atp2b3a-002 protein_coding Danio_rerio 0 1895
ENSDART00000090252 atp2b3a-202 protein_coding Danio_rerio 0 1858
ENSDART00000135811 atp2b3a-001 protein_coding Danio_rerio 0 1762
ENSDART00000014257 atp2b1a-201 protein_coding Danio_rerio 0 1238
ENSDART00000128079 atp2b1a-202 protein_coding Danio_rerio 0 1057
ENSDART00000077664 atp2b1a-001 protein_coding Danio_rerio 0 1057
ENSDART00000104353 atp2b1b-001 protein_coding Danio_rerio 0 1002
ENST00000263519 ATP2B3-201 protein_coding Homo_sapiens 0 4193
ENST00000341360 ATP2B4-002 protein_coding Homo_sapiens 0 1456
ENST00000349466 ATP2B3-002 protein_coding Homo_sapiens 0 4385
ENST00000352432 ATP2B2-001 protein_coding Homo_sapiens 0 1722
ENST00000357681 ATP2B4-001 protein_coding Homo_sapiens 0 1454
ENST00000359149 ATP2B3-006 protein_coding Homo_sapiens 0 4855
ENST00000360273 ATP2B2-201 protein_coding Homo_sapiens 0 1722
ENST00000367218 ATP2B4-201 protein_coding Homo_sapiens 0 1456
ENST00000370186 ATP2B3-001 protein_coding Homo_sapiens 0 3648
ENST00000383800 ATP2B2-002 protein_coding Homo_sapiens 0 1722
ENST00000393842 ATP2B3-004 protein_coding Homo_sapiens 0 3208
ENST00000397077 ATP2B2-005 protein_coding Homo_sapiens 0 1722
ENST00000452124 ATP2B2-003 protein_coding Homo_sapiens 0 2104
ENST00000460129 ATP2B2-004 nonsense_mediated_decay Homo_sapiens 0 1766
ENST00000460549 ATP2B3-003 processed_transcript Homo_sapiens 0 425
ENST00000496610 ATP2B3-005 processed_transcript Homo_sapiens 0 442

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