C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114554 Gabra3-002 ENSMUSG00000031343 10090 - X:72434575-72656848 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114554
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114554 1.017±0.12 1.102±0.20 1.854±1.04 0.249±0.06 0.259±0.08 0.883±0.34 0.218±0.12 0.750±0.05 0.012±0.00 2.144±0.98 0.038±0.01 0.179±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000115 CIL_000115_0002 CGP X:72432681-72842602

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005886 IEA plasma membrane
GO:0006821 IEA chloride transport
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0034220 IEA ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370314 GABRA3-001 protein_coding Homo_sapiens 0 2091
ENST00000417858 GABRA3-004 processed_transcript Homo_sapiens 0 292
ENST00000497894 GABRA3-003 processed_transcript Homo_sapiens 0 350
ENST00000535043 GABRA3-005 protein_coding Homo_sapiens 0 2010

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