C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114577 Vma21-002 ENSMUSG00000073131 10090 + X:71815924-71824706 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLungMuscleOvaryPlacentaENSMUST00000114577
Transcript ID Adipose Breast Colon Heart Kidney Lung Muscle Ovary Placenta
ENSMUST00000114577 0.552±0.11 0.796±0.56 0.396±0.17 0.736±0.09 0.438±0.00 0.897±0.04 3.014±0.89 0.728±0.22 1.905±1.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DG CIL_0009DG_0002 VISTA X:71400355-72001555
CIL_0001AU CIL_0001AU_0002 CGP X:71663667-71839757

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330374 VMA21-001 protein_coding Homo_sapiens 0 351
ENST00000370361 VMA21-003 protein_coding Homo_sapiens 0 433
ENST00000477649 VMA21-002 processed_transcript Homo_sapiens 0 350

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