C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule-associated protein, RP/EB family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114724 Mapre3-002 ENSMUSG00000029166 10090 + 5:30814754-30866059 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114724
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114724 5.226±0.79 30.784±4.06 7.170±0.80 52.803±24.65 6.719±0.89 8.498±1.25 7.702±2.49 8.231±1.97 5.228±4.41 15.688±2.54 5.640±0.93 11.259±4.95 5.179±3.64 44.759±6.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0002 VISTA 5:30314016-30916922
CIL_00004I CIL_00004I_0002 CGP 5:30711564-30866106
CIL_00004J CIL_00004J_0002 CGP 5:30814641-30879191

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008017 IEA microtubule binding
GO:0035371 IDA microtubule plus-end
GO:1903033 IGI positive regulation of microtubule plus-end binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000129167 mapre1b-201 protein_coding Danio_rerio 0 261
ENSDART00000136740 mapre1b-003 protein_coding Danio_rerio 0 261
ENSDART00000133602 mapre1b-002 retained_intron Danio_rerio 0 261
ENSDART00000004474 mapre1b-001 protein_coding Danio_rerio 0 261
ENST00000233121 MAPRE3-001 protein_coding Homo_sapiens 0 898
ENST00000402218 MAPRE3-004 protein_coding Homo_sapiens 0 1123
ENST00000405074 MAPRE3-002 protein_coding Homo_sapiens 0 1779
ENST00000458529 MAPRE3-003 protein_coding Homo_sapiens 0 697
ENST00000474367 MAPRE3-005 retained_intron Homo_sapiens 0 429
ENST00000475633 MAPRE3-006 retained_intron Homo_sapiens 0 617
ENST00000481222 MAPRE3-009 retained_intron Homo_sapiens 0 429
ENST00000491354 MAPRE3-008 processed_transcript Homo_sapiens 0 195
ENST00000494788 MAPRE3-007 retained_intron Homo_sapiens 0 385

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