C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta sub
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114786 Hadhb-002 ENSMUSG00000059447 10090 + 5:30155272-30184587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114786
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114786 38.113±14.98 57.720±7.14 21.025±1.65 2.348±0.35 52.829±14.91 16.664±4.70 226.984±37.33 45.861±5.57 32.209±15.38 17.832±4.95 43.656±7.22 12.015±3.62 9.432±5.14 1.595±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DK CIL_0007DK_0002 CGP 5:30118301-30184593
CIL_0007DJ CIL_0007DJ_0002 CGP 5:30155248-30205722

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000062 IEA fatty-acyl-CoA binding
GO:0003857 IEA 3-hydroxyacyl-CoA dehydrogenase activity
GO:0003988 IDA acetyl-CoA C-acyltransferase activity
GO:0004300 IEA enoyl-CoA hydratase activity
GO:0005515 IEA protein binding
GO:0005739 TAS mitochondrion
GO:0005741 ISS mitochondrial outer membrane
GO:0005743 IDA mitochondrial inner membrane
GO:0005783 ISS endoplasmic reticulum
GO:0006635 IEA fatty acid beta-oxidation
GO:0016507 IC mitochondrial fatty acid beta-oxidation multienzyme complex
GO:0016508 IEA long-chain-enoyl-CoA hydratase activity
GO:0016509 IMP long-chain-3-hydroxyacyl-CoA dehydrogenase activity
GO:0032403 IEA protein complex binding
GO:0042645 IEA mitochondrial nucleoid
GO:0044822 IEA poly(A) RNA binding
GO:0051287 IEA NAD binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317799 HADHB-001 protein_coding Homo_sapiens 0 1882
ENST00000405867 HADHB-002 protein_coding Homo_sapiens 0 900
ENST00000425035 HADHB-004 protein_coding Homo_sapiens 0 645
ENST00000434972 RP11-555H23.1-001 processed_pseudogene Homo_sapiens 0 1371
ENST00000448743 HADHB-007 protein_coding Homo_sapiens 0 549
ENST00000494615 HADHB-003 processed_transcript Homo_sapiens 0 1784
ENST00000537713 HADHB-201 protein_coding Homo_sapiens 0 1633
ENST00000545822 HADHB-202 protein_coding Homo_sapiens 0 1783

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