C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA segment, Chr 17, Wayne State University 92, expressed
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114859 D17Wsu92e-003 ENSMUSG00000056692 10090 - 17:27751246-27820491 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114859
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114859 28.398±7.38 77.475±9.56 11.815±0.06 12.273±7.15 34.110±8.89 25.264±4.98 27.260±3.20 46.687±6.81 32.089±25.67 42.311±1.30 18.453±2.55 20.091±6.07 10.838±2.24 4.651±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LT CIL_0004LT_0003 CGP 17:27714352-27820558
CIL_000258 CIL_000258_0002 CGP 17:27751232-27851968

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000114920 C6H6orf106-201 protein_coding Danio_rerio 0 470
ENSDART00000156501 C6H6orf106-001 protein_coding Danio_rerio 0 470
ENST00000374021 C6orf106-002 protein_coding Homo_sapiens 0 715
ENST00000374023 C6orf106-001 protein_coding Homo_sapiens 0 968
ENST00000374026 C6orf106-003 protein_coding Homo_sapiens 0 551
ENST00000453101 AC114755.3-001 processed_pseudogene Homo_sapiens 0 749

Loading