C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114882 Rps10-001 ENSMUSG00000052146 10090 - 17:27630422-27635276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114882
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114882 68.244±7.87 424.919±36.85 201.988±107.40 58.832±9.11 82.952±43.05 67.042±11.72 100.546±31.21 278.096±264.57 34.990±7.21 151.993±19.31 130.292±94.47 265.969±153.04 57.309±16.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PV CIL_0001PV_0003 CGP 17:27579382-27636629
CIL_0004LP CIL_0004LP_0003 CGP 17:27630422-27711106

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000028 IEA ribosomal small subunit assembly
GO:0003735 IEA structural constituent of ribosome
GO:0005730 ISS nucleolus
GO:0005840 IEA ribosome
GO:0022627 IEA cytosolic small ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326199 RPS10-001 protein_coding Homo_sapiens 0 760
ENST00000344700 RPS10-005 protein_coding Homo_sapiens 0 604
ENST00000393266 RP11-212P7.1-001 processed_pseudogene Homo_sapiens 6e-32 141
ENST00000408001 RP3-375P9.2-001 processed_pseudogene Homo_sapiens 0 601
ENST00000439253 RPS10P3-001 processed_pseudogene Homo_sapiens 0 603
ENST00000453641 RP11-65N13.6-001 processed_pseudogene Homo_sapiens 0 326
ENST00000460492 RP11-464D20.2-001 processed_pseudogene Homo_sapiens 0 424
ENST00000464218 RPS10-004 processed_transcript Homo_sapiens 0 688
ENST00000467531 RPS10-003 processed_transcript Homo_sapiens 0 688
ENST00000467930 RP11-425L10.1-001 processed_pseudogene Homo_sapiens 0 662
ENST00000469528 GAPVD1-018 processed_transcript Homo_sapiens 1e-29 134
ENST00000471205 RP11-215P8.1-001 processed_pseudogene Homo_sapiens 0 518
ENST00000480396 RPS10P28-001 processed_pseudogene Homo_sapiens 0 566
ENST00000480942 RPS10-006 processed_transcript Homo_sapiens 0 473
ENST00000482594 RP11-134G8.6-001 transcribed_processed_pseudogene Homo_sapiens 0 564
ENST00000483812 RPS10P16-001 unprocessed_pseudogene Homo_sapiens 0 555
ENST00000485426 RP11-435F17.1-001 processed_pseudogene Homo_sapiens 0 580
ENST00000492704 RPS10L-001 processed_pseudogene Homo_sapiens 0 359
ENST00000494077 RPS10-002 processed_transcript Homo_sapiens 0 688
ENST00000494130 RPS10P20-001 transcribed_processed_pseudogene Homo_sapiens 0 457
ENST00000495588 GAPVD1-004 processed_transcript Homo_sapiens 2e-30 135
ENST00000508621 RP11-366M4.17-001 processed_pseudogene Homo_sapiens 0 322
ENST00000548913 C12orf54-005 processed_transcript Homo_sapiens 0 510
ENST00000586795 RPS10P27-001 processed_pseudogene Homo_sapiens 0 499
ENST00000604757 GS1-21A4.2-001 processed_pseudogene Homo_sapiens 0 446
ENST00000605528 RPS10-NUDT3-001 protein_coding Homo_sapiens 0 625
ENST00000621356 RPS10-201 protein_coding Homo_sapiens 0 688

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