C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tyrosine kinase, non-receptor, 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115124 Tnk2-001 ENSMUSG00000022791 10090 + 16:32644673-32683493 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000115124
Transcript ID Bladder Brain Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000115124 10.143±1.74 19.610±15.75 1.420±0.17 1.232±0.00 2.028±0.98 6.207±1.19 9.467±0.00 3.215±2.53 1.373±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QR CIL_0008QR_0002 VISTA 16:32268412-32870796
CIL_0007CJ CIL_0007CJ_0003 CGP 16:32608920-32683493

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004712 IEA protein serine/threonine/tyrosine kinase activity
GO:0005154 IEA epidermal growth factor receptor binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005905 IEA coated pit
GO:0016020 IEA membrane
GO:0016310 IEA phosphorylation
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0030136 IEA clathrin-coated vesicle
GO:0030424 IDA axon
GO:0030425 IDA dendrite
GO:0030426 IDA growth cone
GO:0043025 IDA neuronal cell body
GO:0050731 IEA positive regulation of peptidyl-tyrosine phosphorylation
GO:0070436 IEA Grb2-EGFR complex
GO:2000369 IEA regulation of clathrin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333602 TNK2-002 protein_coding Homo_sapiens 0 2122
ENST00000381916 TNK2-005 protein_coding Homo_sapiens 0 3435
ENST00000416152 TNK2-010 protein_coding Homo_sapiens 0 2231
ENST00000420716 TNK2-011 retained_intron Homo_sapiens 0 1905
ENST00000428187 TNK2-007 protein_coding Homo_sapiens 0 1975
ENST00000430929 TNK2-017 nonsense_mediated_decay Homo_sapiens 0 462
ENST00000438207 TNK2-016 protein_coding Homo_sapiens 0 819
ENST00000439230 TNK2-004 nonsense_mediated_decay Homo_sapiens 0 1860
ENST00000447060 TNK2-015 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000464041 TNK2-006 retained_intron Homo_sapiens 0 771
ENST00000468819 TNK2-003 processed_transcript Homo_sapiens 0 839
ENST00000478715 TNK2-023 retained_intron Homo_sapiens 0.000000000001 79
ENST00000481865 TNK2-009 retained_intron Homo_sapiens 0 1402
ENST00000495247 TNK2-024 processed_transcript Homo_sapiens 0 357

Loading