C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BEN domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115161 Bend6-003 ENSMUSG00000042182 10090 - 1:33852052-33907790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000115161
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000115161 0.622±0.35 0.252±0.02 1.116±0.00 0.309±0.19 0.247±0.00 0.036±0.00 0.123±0.04 0.080±0.04 0.051±0.01 0.118±0.08 1.157±0.00 0.353±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087X CIL_00087X_0002 VISTA 1:33689736-34292240

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0001106 IGI RNA polymerase II transcription corepressor activity
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0045666 IMP positive regulation of neuron differentiation
GO:0045746 IDA negative regulation of Notch signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370746 BEND6-004 protein_coding Homo_sapiens 0 673
ENST00000484701 BEND6-002 processed_transcript Homo_sapiens 0 479

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