C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | RNA binding motif protein 10 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000115375  |
Rbm10-004 |
ENSMUSG00000031060 |
10090 | + |
X:20617503-20650888  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005GB | CIL_0005GB_0002 | CGP | X:20549787-20617619 |
| CIL_0005GA | CIL_0005GA_0002 | CGP | X:20615326-20650901 |
| CIL_0005G9 | CIL_0005G9_0002 | CGP | X:20617503-20683179 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000122 | IDA | negative regulation of transcription from RNA polymerase II promoter |
| GO:0000166 | IEA | nucleotide binding |
| GO:0008270 | IEA | zinc ion binding |
| GO:0008285 | IDA | negative regulation of cell proliferation |
| GO:0034391 | IGI | regulation of smooth muscle cell apoptotic process |
| GO:0034393 | IDA | positive regulation of smooth muscle cell apoptotic process |
| GO:0048025 | IMP | negative regulation of mRNA splicing, via spliceosome |
| GO:0070935 | IDA | 3'-UTR-mediated mRNA stabilization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000329236
|
RBM10-201 | protein_coding | Homo_sapiens | 0 | 3849 |
|
ENST00000345781
|
RBM10-001 | protein_coding | Homo_sapiens | 0 | 2981 |
|
ENST00000377604
|
RBM10-005 | protein_coding | Homo_sapiens | 0 | 3766 |
|
ENST00000377811
|
NDUFB11-001 | protein_coding | Homo_sapiens | 0 | 315 |
|
ENST00000478410
|
RBM10-004 | processed_transcript | Homo_sapiens | 0 | 715 |
|
ENST00000496012
|
RBM10-003 | processed_transcript | Homo_sapiens | 0 | 387 |
