C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4, gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115461 Eif4g1-004 ENSMUSG00000045983 10090 + 16:20673420-20692883 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000115461
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000115461 27.566±1.15 19.829±4.84 17.013±1.49 15.881±4.94 23.986±3.35 27.848±4.17 15.503±4.51 15.627±5.40 21.242±9.95 17.153±2.04 41.251±5.65 30.119±5.76 27.216±10.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000572 CIL_000572_0002 CGP 16:20651652-20692884
CIL_00056Z CIL_00056Z_0002 CGP 16:20668313-20703048

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319274 EIF4G1-201 protein_coding Homo_sapiens 0 5336
ENST00000342981 EIF4G1-001 protein_coding Homo_sapiens 0 6562
ENST00000346169 EIF4G1-007 protein_coding Homo_sapiens 0 6316
ENST00000350481 EIF4G1-009 protein_coding Homo_sapiens 0 5677
ENST00000352767 EIF4G1-202 protein_coding Homo_sapiens 0 6133
ENST00000382330 EIF4G1-014 protein_coding Homo_sapiens 0 5794
ENST00000392537 EIF4G1-003 protein_coding Homo_sapiens 0 5962
ENST00000411531 EIF4G1-038 protein_coding Homo_sapiens 0 5507
ENST00000413967 EIF4G1-004 nonsense_mediated_decay Homo_sapiens 0 2844
ENST00000414031 EIF4G1-010 protein_coding Homo_sapiens 0 6100
ENST00000421110 EIF4G1-006 protein_coding Homo_sapiens 0 3075
ENST00000422614 EIF4G1-034 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000424196 EIF4G1-013 protein_coding Homo_sapiens 0 6130
ENST00000426123 EIF4G1-005 protein_coding Homo_sapiens 0 3005
ENST00000427141 EIF4G1-023 protein_coding Homo_sapiens 0 610
ENST00000427607 EIF4G1-028 protein_coding Homo_sapiens 0 652
ENST00000427845 EIF4G1-012 protein_coding Homo_sapiens 0 5459
ENST00000428387 EIF4G1-027 protein_coding Homo_sapiens 0 619
ENST00000434061 EIF4G1-016 protein_coding Homo_sapiens 0 5411
ENST00000435046 EIF4G1-041 protein_coding Homo_sapiens 0 5334
ENST00000440448 EIF4G1-022 protein_coding Homo_sapiens 0 643
ENST00000441154 EIF4G1-039 protein_coding Homo_sapiens 0 4948
ENST00000442406 EIF4G1-002 nonsense_mediated_decay Homo_sapiens 0 5252
ENST00000444134 EIF4G1-037 protein_coding Homo_sapiens 0 545
ENST00000444861 EIF4G1-015 protein_coding Homo_sapiens 0 2693
ENST00000448284 EIF4G1-031 protein_coding Homo_sapiens 0 784
ENST00000450424 EIF4G1-008 protein_coding Homo_sapiens 0 3062
ENST00000455679 EIF4G1-020 protein_coding Homo_sapiens 0 521
ENST00000456033 EIF4G1-024 protein_coding Homo_sapiens 0 427
ENST00000457456 EIF4G1-029 protein_coding Homo_sapiens 0 948
ENST00000460829 EIF4G1-017 retained_intron Homo_sapiens 0 881
ENST00000466311 EIF4G1-032 retained_intron Homo_sapiens 0 497
ENST00000475721 EIF4G1-018 retained_intron Homo_sapiens 0 1408
ENST00000478291 EIF4G1-035 retained_intron Homo_sapiens 9.80909e-45 183
ENST00000482303 EIF4G1-033 retained_intron Homo_sapiens 0 287
ENST00000484862 EIF4G1-025 retained_intron Homo_sapiens 0 649
ENST00000485712 EIF4G1-021 retained_intron Homo_sapiens 0 222
ENST00000493299 EIF4G1-030 retained_intron Homo_sapiens 0 342

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