C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRM2 tRNA methyltransferase 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115640 Trmt2a-002 ENSMUSG00000022721 10090 + 16:18248883-18253502 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115640
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115640 16.310±2.36 18.686±1.35 11.159±0.98 20.916±2.61 17.452±3.87 13.742±2.62 5.985±0.97 9.509±0.49 13.278±8.81 13.983±1.03 3.329±0.48 23.390±2.34 14.021±0.64 8.991±0.71

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001510 IEA RNA methylation
GO:0006396 IEA RNA processing
GO:0008173 IEA RNA methyltransferase activity
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252136 TRMT2A-001 protein_coding Homo_sapiens 0 1611
ENST00000403707 TRMT2A-005 protein_coding Homo_sapiens 0 1611
ENST00000404751 TRMT2A-002 protein_coding Homo_sapiens 0 1509
ENST00000439169 TRMT2A-003 protein_coding Homo_sapiens 0 377
ENST00000444256 TRMT2A-019 protein_coding Homo_sapiens 9e-35 150
ENST00000444845 TRMT2A-016 protein_coding Homo_sapiens 2e-34 150
ENST00000480339 TRMT2A-015 retained_intron Homo_sapiens 0 257
ENST00000487378 TRMT2A-014 retained_intron Homo_sapiens 0 331
ENST00000487668 TRMT2A-017 retained_intron Homo_sapiens 2e-34 150

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