C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L31, pseudogene 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116034 Rpl31-ps10-001 ENSMUSG00000070667 10090 + 4:137395299-137395676 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000116034
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000116034 0.254±0.13 0.273±0.10 0.220±0.08 0.343±0.00 0.160±0.00 0.143±0.00 0.300±0.28 0.175±0.00 0.137±0.00 0.233±0.03 0.715±0.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000075402 rpl31-201 protein_coding Danio_rerio 0 255
ENSDART00000149851 rpl31-002 protein_coding Danio_rerio 0 255
ENSDART00000149554 rpl31-001 protein_coding Danio_rerio 0 255
ENSDART00000148688 rpl31-003 retained_intron Danio_rerio 0 233
ENSDART00000148984 rpl31-004 retained_intron Danio_rerio 4e-23 111
ENST00000264258 RPL31-001 protein_coding Homo_sapiens 0 483
ENST00000406329 RPL31P28-001 processed_pseudogene Homo_sapiens 0 305
ENST00000409000 RPL31-006 protein_coding Homo_sapiens 0 339
ENST00000409028 RPL31-007 protein_coding Homo_sapiens 0 429
ENST00000409038 RPL31-008 protein_coding Homo_sapiens 0 431
ENST00000409320 RPL31-002 protein_coding Homo_sapiens 0 429
ENST00000409650 RPL31-009 protein_coding Homo_sapiens 0 433
ENST00000409711 RPL31-004 protein_coding Homo_sapiens 0 339
ENST00000409733 RPL31-010 protein_coding Homo_sapiens 0 483
ENST00000419276 RPL31-003 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000426558 RPL31P11-002 processed_transcript Homo_sapiens 0 405
ENST00000431058 RPL31P35-001 processed_pseudogene Homo_sapiens 0 398
ENST00000431088 AC016712.2-001 processed_pseudogene Homo_sapiens 0 444
ENST00000449702 AC104306.1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000454082 RPL31P11-001 transcribed_processed_pseudogene Homo_sapiens 0 405
ENST00000456292 RPL31-005 protein_coding Homo_sapiens 0 429

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