C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116115 Rps23-ps-001 ENSMUSG00000100755 10090 + 3:37714740-37715164 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000116115
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000116115 0.463±0.20 0.261±0.01 11.569±8.39 20.755±1.18 1.068±0.29 1.530±0.35 1.475±0.66 4.248±0.20 17.104±23.35 1.531±0.82 1.272±0.12 5.690±0.00 3.233±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V2 CIL_0007V2_0002 VISTA 3:37371698-37974083
CIL_00099R CIL_00099R_0002 VISTA 3:37594700-38198826

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296674 RPS23-001 protein_coding Homo_sapiens 0 542
ENST00000429775 RPS23P8-001 processed_pseudogene Homo_sapiens 0 398
ENST00000466210 RPS23P7-001 processed_pseudogene Homo_sapiens 0 403
ENST00000503605 RPS23-003 processed_transcript Homo_sapiens 0 486
ENST00000504293 RPS23-004 retained_intron Homo_sapiens 0 536
ENST00000507980 RPS23-006 protein_coding Homo_sapiens 0 219
ENST00000508814 ATG10-010 processed_transcript Homo_sapiens 9.94922e-44 180
ENST00000510210 RPS23-008 protein_coding Homo_sapiens 0 460
ENST00000512493 RPS23-007 protein_coding Homo_sapiens 0 460
ENST00000514253 ATG10-009 processed_transcript Homo_sapiens 2.99878e-43 180

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