C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116269 Cln3-201 ENSMUSG00000030720 10090 - 7:126571400-126584280 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TS CIL_0005TS_0002 CGP 7:126571207-126589112

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000046 IMP autophagic vacuole fusion
GO:0000139 ISS Golgi membrane
GO:0001508 IMP action potential
GO:0001575 ISS globoside metabolic process
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005764 IDA lysosome
GO:0005765 IEA:ISS lysosomal membrane
GO:0005769 IDA:ISS early endosome
GO:0005770 IDA late endosome
GO:0005776 IDA autophagic vacuole
GO:0005783 ISS endoplasmic reticulum
GO:0005794 ISS Golgi apparatus
GO:0005795 ISS Golgi stack
GO:0005802 ISS trans-Golgi network
GO:0005886 ISS plasma membrane
GO:0005901 ISS caveola
GO:0006520 IMP cellular amino acid metabolic process
GO:0006672 ISS ceramide metabolic process
GO:0006678 ISS glucosylceramide metabolic process
GO:0006681 ISS galactosylceramide metabolic process
GO:0006684 ISS sphingomyelin metabolic process
GO:0006865 IMP amino acid transport
GO:0006898 ISS receptor-mediated endocytosis
GO:0007034 IBA vacuolar transport
GO:0007040 IMP lysosome organization
GO:0007042 IBA:ISS lysosomal lumen acidification
GO:0008021 ISS synaptic vesicle
GO:0008306 IMP associative learning
GO:0010468 ISO regulation of gene expression
GO:0015809 IBA:ISS arginine transport
GO:0016021 ISS integral component of membrane
GO:0016236 IMP macroautophagy
GO:0016242 IMP negative regulation of macroautophagy
GO:0016485 IMP protein processing
GO:0030176 ISS integral component of endoplasmic reticulum membrane
GO:0031301 IBA integral component of organelle membrane
GO:0031410 IDA cytoplasmic vesicle
GO:0035235 IMP ionotropic glutamate receptor signaling pathway
GO:0035752 ISS lysosomal lumen pH elevation
GO:0042133 IMP neurotransmitter metabolic process
GO:0042987 ISS amyloid precursor protein catabolic process
GO:0043005 ISS neuron projection
GO:0043066 ISS negative regulation of apoptotic process
GO:0043086 IMP negative regulation of catalytic activity
GO:0043524 IDA negative regulation of neuron apoptotic process
GO:0045121 ISS membrane raft
GO:0045861 IMP negative regulation of proteolysis
GO:0047496 ISS vesicle transport along microtubule
GO:0048306 IPI calcium-dependent protein binding
GO:0050885 IMP neuromuscular process controlling balance
GO:0051480 IDA cytosolic calcium ion homeostasis
GO:0061024 IMP membrane organization

Homologs

No Homologs available.

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